Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Gm25745-201ENSMUST00000174945 133 ntBASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Gm7461-201ENSMUST00000058918 827 ntBASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6d-4Q5R1I0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6d-4Q5R1I0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6d-4Q5R1I0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6d-4Q5R1I0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6d-4Q5R1I0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.52□□□□□ -0.24
Trav6d-4Q5R1I0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6d-4Q5R1I0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Gm28659-201ENSMUST00000188013 759 ntBASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Gm5864-201ENSMUST00000202263 970 ntBASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6d-4Q5R1I0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Mir8098-201ENSMUST00000184011 137 ntBASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Trav6d-4Q5R1I0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-4Q5R1I0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms