Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Gm18032-201ENSMUST00000222541 538 ntBASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.9□□□□□ -0.19
Trav5d-4Q5R1F6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav5d-4Q5R1F6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
Trav5d-4Q5R1F6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Gm11355-201ENSMUST00000121120 306 ntBASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav5d-4Q5R1F6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav5d-4Q5R1F6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav5d-4Q5R1F6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms