Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Gm42642-201ENSMUST00000200683 355 ntBASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav3-3Q5R1C3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav3-3Q5R1C3 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.15□□□□□ -0.47
Trav3-3Q5R1C3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav3-3Q5R1C3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.15□□□□□ -0.47
Trav3-3Q5R1C3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 AV356131-201ENSMUST00000206201 750 ntBASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Gm5874-201ENSMUST00000096101 508 ntBASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav3-3Q5R1C3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms