Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav8d-2Q5R1B6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 AA543401-201ENSMUST00000164248 1269 ntBASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Trav8d-2Q5R1B6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-2Q5R1B6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Gm18489-201ENSMUST00000172565 551 ntBASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Gm9682-201ENSMUST00000197505 556 ntBASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-2Q5R1B6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-2Q5R1B6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms