Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf20Q5DTM8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf20Q5DTM8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Gm23634-201ENSMUST00000175071 91 ntBASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf20Q5DTM8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Gm6659-201ENSMUST00000174752 547 ntBASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf20Q5DTM8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Gm11950-201ENSMUST00000121615 838 ntBASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf20Q5DTM8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Gm6345-202ENSMUST00000180900 204 ntBASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf20Q5DTM8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf20Q5DTM8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms