Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.98■□□□□ 0.15
Scn2bQ56A07 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn2bQ56A07 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Prob1-201ENSMUST00000097619 3021 ntBASIC15.97■□□□□ 0.15
Scn2bQ56A07 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.97■□□□□ 0.15
Scn2bQ56A07 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.97■□□□□ 0.15
Scn2bQ56A07 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Scn2bQ56A07 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.97■□□□□ 0.15
Scn2bQ56A07 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.97■□□□□ 0.15
Scn2bQ56A07 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn2bQ56A07 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.96■□□□□ 0.15
Scn2bQ56A07 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.96■□□□□ 0.15
Scn2bQ56A07 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.96■□□□□ 0.15
Scn2bQ56A07 Gm22697-201ENSMUST00000175194 63 ntBASIC15.96■□□□□ 0.15
Scn2bQ56A07 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn2bQ56A07 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Scn2bQ56A07 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Scn2bQ56A07 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Scn2bQ56A07 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Gm18421-201ENSMUST00000204122 625 ntBASIC15.95■□□□□ 0.14
Scn2bQ56A07 Gm18101-201ENSMUST00000215769 548 ntBASIC15.95■□□□□ 0.14
Scn2bQ56A07 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Gm7213-201ENSMUST00000215977 950 ntBASIC15.95■□□□□ 0.14
Scn2bQ56A07 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.95■□□□□ 0.14
Scn2bQ56A07 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn2bQ56A07 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms