Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsmem1Q3UQS2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Lsmem1Q3UQS2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Gm12895-201ENSMUST00000122214 226 ntBASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Gm28033-201ENSMUST00000184224 96 ntBASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.35■□□□□ 0.21
Lsmem1Q3UQS2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lsmem1Q3UQS2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Lsmem1Q3UQS2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsmem1Q3UQS2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsmem1Q3UQS2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Gm9103-201ENSMUST00000119371 405 ntBASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Gm10819-201ENSMUST00000099988 561 ntBASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsmem1Q3UQS2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Gm15165-201ENSMUST00000118140 502 ntBASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsmem1Q3UQS2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lsmem1Q3UQS2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.31■□□□□ 0.2
Lsmem1Q3UQS2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsmem1Q3UQS2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsmem1Q3UQS2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsmem1Q3UQS2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsmem1Q3UQS2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsmem1Q3UQS2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsmem1Q3UQS2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms