Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1brtQ3UNC9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Cks1brtQ3UNC9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks1brtQ3UNC9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms