Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Naf1Q3UMQ8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Naf1Q3UMQ8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Gm7862-201ENSMUST00000121461 292 ntBASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Gm6376-201ENSMUST00000209407 580 ntBASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Naf1Q3UMQ8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Naf1Q3UMQ8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Naf1Q3UMQ8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Naf1Q3UMQ8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.32■□□□□ 0.2
Naf1Q3UMQ8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms