Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdlim7Q3TJD7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdlim7Q3TJD7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
Pdlim7Q3TJD7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdlim7Q3TJD7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pdlim7Q3TJD7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.02■□□□□ 0.47
Pdlim7Q3TJD7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdlim7Q3TJD7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Gm17968-201ENSMUST00000194902 784 ntBASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim7Q3TJD7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 AA543401-201ENSMUST00000164248 1269 ntBASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 AC154572.2-201ENSMUST00000225105 997 ntBASIC18■□□□□ 0.47
Pdlim7Q3TJD7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pdlim7Q3TJD7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim7Q3TJD7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm8825-201ENSMUST00000182565 998 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm4518-201ENSMUST00000182638 718 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm27494-201ENSMUST00000184735 189 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim7Q3TJD7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms