Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.38□□□□□ -0.27
Trim63Q38HM4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim63Q38HM4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.37□□□□□ -0.27
Trim63Q38HM4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim63Q38HM4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim63Q38HM4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.36□□□□□ -0.27
Trim63Q38HM4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.36□□□□□ -0.27
Trim63Q38HM4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Trim63Q38HM4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trim63Q38HM4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Gm5921-201ENSMUST00000075898 882 ntBASIC13.35□□□□□ -0.27
Trim63Q38HM4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim63Q38HM4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms