Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col19a1Q0VF58 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col19a1Q0VF58 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col19a1Q0VF58 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col19a1Q0VF58 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col19a1Q0VF58 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col19a1Q0VF58 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.15■□□□□ 0.34
Col19a1Q0VF58 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.15■□□□□ 0.34
Col19a1Q0VF58 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col19a1Q0VF58 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col19a1Q0VF58 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col19a1Q0VF58 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col19a1Q0VF58 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Grk6-207ENSMUST00000225925 2769 ntBASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.13■□□□□ 0.33
Col19a1Q0VF58 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.13■□□□□ 0.33
Col19a1Q0VF58 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Gm18489-201ENSMUST00000172565 551 ntBASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Thap2-203ENSMUST00000218989 527 ntBASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col19a1Q0VF58 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.11■□□□□ 0.33
Col19a1Q0VF58 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms