Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 App-207ENSMUST00000227737 2827 ntBASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ptchd3Q0EEE2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Gm7791-201ENSMUST00000219066 539 ntBASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ptchd3Q0EEE2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ptchd3Q0EEE2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ptchd3Q0EEE2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ptchd3Q0EEE2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ptchd3Q0EEE2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ptchd3Q0EEE2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ptchd3Q0EEE2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ptchd3Q0EEE2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ptchd3Q0EEE2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Gm37055-201ENSMUST00000191866 133 ntBASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms