Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm11643-201ENSMUST00000119578 864 ntBASIC14.81□□□□□ -0.04
Scn1bP97952 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn1bP97952 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1bP97952 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scn1bP97952 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1bP97952 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1bP97952 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1bP97952 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1bP97952 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1bP97952 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1bP97952 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn1bP97952 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn1bP97952 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn1bP97952 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Scn1bP97952 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1bP97952 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scn1bP97952 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Scn1bP97952 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.79□□□□□ -0.04
Scn1bP97952 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scn1bP97952 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn1bP97952 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.79□□□□□ -0.04
Scn1bP97952 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.79□□□□□ -0.04
Scn1bP97952 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.79□□□□□ -0.04
Scn1bP97952 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.79□□□□□ -0.04
Scn1bP97952 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.79□□□□□ -0.04
Scn1bP97952 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Scn1bP97952 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.79□□□□□ -0.04
Scn1bP97952 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Scn1bP97952 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Scn1bP97952 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn1bP97952 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Scn1bP97952 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn1bP97952 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Gm12896-201ENSMUST00000118430 226 ntBASIC14.78□□□□□ -0.04
Scn1bP97952 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn1bP97952 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.78□□□□□ -0.04
Scn1bP97952 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn1bP97952 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.78□□□□□ -0.04
Scn1bP97952 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn1bP97952 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn1bP97952 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn1bP97952 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Scn1bP97952 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn1bP97952 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
Scn1bP97952 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn1bP97952 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn1bP97952 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn1bP97952 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms