Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Nkx2-3P97334 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.24■□□□□ 0.83
Nkx2-3P97334 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.24■□□□□ 0.83
Nkx2-3P97334 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.24■□□□□ 0.83
Nkx2-3P97334 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.24■□□□□ 0.83
Nkx2-3P97334 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx2-3P97334 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Gm15358-201ENSMUST00000119249 520 ntBASIC20.23■□□□□ 0.83
Nkx2-3P97334 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx2-3P97334 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.22■□□□□ 0.83
Nkx2-3P97334 Gm37153-201ENSMUST00000193637 231 ntBASIC20.22■□□□□ 0.83
Nkx2-3P97334 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.22■□□□□ 0.83
Nkx2-3P97334 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx2-3P97334 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Nkx2-3P97334 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.21■□□□□ 0.83
Nkx2-3P97334 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nkx2-3P97334 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.2■□□□□ 0.82
Nkx2-3P97334 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx2-3P97334 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Chchd1-203ENSMUST00000224633 557 ntBASIC20.19■□□□□ 0.82
Nkx2-3P97334 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.19■□□□□ 0.82
Nkx2-3P97334 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms