Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.38□□□□□ -0.11
SgcbP82349 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Rprl3-201ENSMUST00000157400 290 ntBASIC14.38□□□□□ -0.11
SgcbP82349 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.38□□□□□ -0.11
SgcbP82349 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SgcbP82349 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SgcbP82349 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.38□□□□□ -0.11
SgcbP82349 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SgcbP82349 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SgcbP82349 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SgcbP82349 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
SgcbP82349 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcbP82349 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SgcbP82349 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.37□□□□□ -0.11
SgcbP82349 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.37□□□□□ -0.11
SgcbP82349 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SgcbP82349 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.37□□□□□ -0.11
SgcbP82349 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.37□□□□□ -0.11
SgcbP82349 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.37□□□□□ -0.11
SgcbP82349 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SgcbP82349 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.37□□□□□ -0.11
SgcbP82349 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.37□□□□□ -0.11
SgcbP82349 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcbP82349 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SgcbP82349 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SgcbP82349 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SgcbP82349 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SgcbP82349 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Gm13312-201ENSMUST00000119631 718 ntBASIC14.36□□□□□ -0.11
SgcbP82349 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.36□□□□□ -0.11
SgcbP82349 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.36□□□□□ -0.11
SgcbP82349 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.36□□□□□ -0.11
SgcbP82349 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.36□□□□□ -0.11
SgcbP82349 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcbP82349 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
SgcbP82349 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SgcbP82349 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SgcbP82349 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SgcbP82349 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.35□□□□□ -0.11
SgcbP82349 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SgcbP82349 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcbP82349 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.35□□□□□ -0.11
SgcbP82349 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.34□□□□□ -0.11
SgcbP82349 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms