Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CiitaP79621 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CiitaP79621 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.43■□□□□ 0.38
CiitaP79621 Gm4535-201ENSMUST00000182274 558 ntBASIC17.43■□□□□ 0.38
CiitaP79621 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.43■□□□□ 0.38
CiitaP79621 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Gm10355-201ENSMUST00000097146 517 ntBASIC17.43■□□□□ 0.38
CiitaP79621 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.43■□□□□ 0.38
CiitaP79621 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CiitaP79621 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.43■□□□□ 0.38
CiitaP79621 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CiitaP79621 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CiitaP79621 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CiitaP79621 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CiitaP79621 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.42■□□□□ 0.38
CiitaP79621 Gm44771-201ENSMUST00000206975 626 ntBASIC17.42■□□□□ 0.38
CiitaP79621 Gm18195-201ENSMUST00000207604 706 ntBASIC17.42■□□□□ 0.38
CiitaP79621 Gm8655-201ENSMUST00000221159 852 ntBASIC17.42■□□□□ 0.38
CiitaP79621 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CiitaP79621 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CiitaP79621 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CiitaP79621 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.41■□□□□ 0.38
CiitaP79621 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CiitaP79621 Gm8097-201ENSMUST00000117903 829 ntBASIC17.41■□□□□ 0.38
CiitaP79621 Gm11780-201ENSMUST00000136880 516 ntBASIC17.41■□□□□ 0.38
CiitaP79621 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.41■□□□□ 0.38
CiitaP79621 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CiitaP79621 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CiitaP79621 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CiitaP79621 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.4■□□□□ 0.38
CiitaP79621 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CiitaP79621 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CiitaP79621 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CiitaP79621 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CiitaP79621 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CiitaP79621 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.4■□□□□ 0.38
CiitaP79621 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CiitaP79621 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.4■□□□□ 0.38
CiitaP79621 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CiitaP79621 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CiitaP79621 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
CiitaP79621 Gm25990-201ENSMUST00000102440 86 ntBASIC17.4■□□□□ 0.38
CiitaP79621 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.4■□□□□ 0.38
CiitaP79621 Gm13418-201ENSMUST00000119097 944 ntBASIC17.4■□□□□ 0.38
CiitaP79621 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CiitaP79621 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.4■□□□□ 0.38
CiitaP79621 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CiitaP79621 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CiitaP79621 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CiitaP79621 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CiitaP79621 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms