Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Six5P70178 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.1■□□□□ 0.01
Six5P70178 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.1■□□□□ 0.01
Six5P70178 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.1■□□□□ 0.01
Six5P70178 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.1■□□□□ 0.01
Six5P70178 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Gm15794-201ENSMUST00000120182 631 ntBASIC15.1■□□□□ 0.01
Six5P70178 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.1■□□□□ 0.01
Six5P70178 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Six5P70178 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Six5P70178 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Six5P70178 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.1■□□□□ 0.01
Six5P70178 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Six5P70178 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Six5P70178 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.09■□□□□ 0.01
Six5P70178 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.09■□□□□ 0.01
Six5P70178 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Gm33142-201ENSMUST00000193913 867 ntBASIC15.09■□□□□ 0.01
Six5P70178 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Six5P70178 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.09■□□□□ 0.01
Six5P70178 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.09■□□□□ 0.01
Six5P70178 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.09■□□□□ 0.01
Six5P70178 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Six5P70178 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.09■□□□□ 0.01
Six5P70178 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.09■□□□□ 0.01
Six5P70178 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Six5P70178 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Six5P70178 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Six5P70178 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Six5P70178 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Six5P70178 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Six5P70178 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Six5P70178 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Six5P70178 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Six5P70178 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Six5P70178 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Six5P70178 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.08■□□□□ 0
Six5P70178 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Six5P70178 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.08■□□□□ 0
Six5P70178 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Six5P70178 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.08■□□□□ 0
Six5P70178 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.08■□□□□ 0
Six5P70178 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.08■□□□□ 0
Six5P70178 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.08■□□□□ 0
Six5P70178 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Six5P70178 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Six5P70178 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Six5P70178 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.07■□□□□ 0
Six5P70178 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.07■□□□□ 0
Six5P70178 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Six5P70178 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.07■□□□□ 0
Six5P70178 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms