Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp46P62069 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp46P62069 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Usp46P62069 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp46P62069 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Usp46P62069 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp46P62069 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp46P62069 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 Mir8098-201ENSMUST00000184011 137 ntBASIC16.84■□□□□ 0.29
Usp46P62069 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp46P62069 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Usp46P62069 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp46P62069 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.84■□□□□ 0.29
Usp46P62069 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp46P62069 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Usp46P62069 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp46P62069 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp46P62069 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp46P62069 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp46P62069 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.83■□□□□ 0.28
Usp46P62069 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp46P62069 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Mzt1-203ENSMUST00000227948 952 ntBASIC16.83■□□□□ 0.28
Usp46P62069 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Usp46P62069 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp46P62069 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.82■□□□□ 0.28
Usp46P62069 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp46P62069 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp46P62069 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp46P62069 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Usp46P62069 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Usp46P62069 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp46P62069 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp46P62069 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Usp46P62069 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.81■□□□□ 0.28
Usp46P62069 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp46P62069 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Usp46P62069 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.81■□□□□ 0.28
Usp46P62069 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.81■□□□□ 0.28
Usp46P62069 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp46P62069 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.81■□□□□ 0.28
Usp46P62069 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp46P62069 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp46P62069 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp46P62069 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms