Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.24□□□□□ -0.13
Sec61a1P61620 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sec61a1P61620 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Gm2274-201ENSMUST00000184539 609 ntBASIC14.24□□□□□ -0.13
Sec61a1P61620 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Sec61a1P61620 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sec61a1P61620 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sec61a1P61620 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sec61a1P61620 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.23□□□□□ -0.13
Sec61a1P61620 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Sec61a1P61620 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sec61a1P61620 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Sec61a1P61620 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sec61a1P61620 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.22□□□□□ -0.13
Sec61a1P61620 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Mir5130-201ENSMUST00000175160 84 ntBASIC14.22□□□□□ -0.13
Sec61a1P61620 Gm45058-201ENSMUST00000205810 766 ntBASIC14.22□□□□□ -0.13
Sec61a1P61620 Gm9731-201ENSMUST00000209480 747 ntBASIC14.22□□□□□ -0.13
Sec61a1P61620 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sec61a1P61620 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sec61a1P61620 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sec61a1P61620 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.21□□□□□ -0.13
Sec61a1P61620 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Sec61a1P61620 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Sec61a1P61620 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sec61a1P61620 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.21□□□□□ -0.13
Sec61a1P61620 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sec61a1P61620 Gm37025-201ENSMUST00000195159 829 ntBASIC14.21□□□□□ -0.13
Sec61a1P61620 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sec61a1P61620 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sec61a1P61620 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sec61a1P61620 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sec61a1P61620 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms