Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl27P61358 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl27P61358 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl27P61358 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl27P61358 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Rpl27P61358 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl27P61358 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl27P61358 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl27P61358 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl27P61358 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Rpl27P61358 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rpl27P61358 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Rpl27P61358 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.41□□□□□ -0.1
Rpl27P61358 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rpl27P61358 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rpl27P61358 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpl27P61358 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpl27P61358 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl27P61358 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rpl27P61358 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpl27P61358 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
Rpl27P61358 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpl27P61358 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rpl27P61358 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rpl27P61358 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpl27P61358 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpl27P61358 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.4□□□□□ -0.1
Rpl27P61358 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Gm10052-201ENSMUST00000168019 960 ntBASIC14.4□□□□□ -0.1
Rpl27P61358 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Rpl27P61358 Gm7729-201ENSMUST00000050143 801 ntBASIC14.4□□□□□ -0.1
Rpl27P61358 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Rpl27P61358 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rpl27P61358 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl27P61358 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rpl27P61358 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.39□□□□□ -0.11
Rpl27P61358 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rpl27P61358 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Rpl27P61358 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Gm44430-201ENSMUST00000203376 995 ntBASIC14.39□□□□□ -0.11
Rpl27P61358 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl27P61358 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl27P61358 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rpl27P61358 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl27P61358 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl27P61358 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rpl27P61358 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl27P61358 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl27P61358 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms