Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sem1P60897 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sem1P60897 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Gm11687-201ENSMUST00000118911 886 ntBASIC15.3■□□□□ 0.04
Sem1P60897 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sem1P60897 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.3■□□□□ 0.04
Sem1P60897 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sem1P60897 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sem1P60897 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sem1P60897 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sem1P60897 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sem1P60897 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sem1P60897 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.29■□□□□ 0.04
Sem1P60897 Gm12134-201ENSMUST00000122109 520 ntBASIC15.29■□□□□ 0.04
Sem1P60897 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.29■□□□□ 0.04
Sem1P60897 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.29■□□□□ 0.04
Sem1P60897 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Gm7432-201ENSMUST00000210343 879 ntBASIC15.29■□□□□ 0.04
Sem1P60897 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.29■□□□□ 0.04
Sem1P60897 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Sem1P60897 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sem1P60897 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Sem1P60897 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Sem1P60897 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sem1P60897 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sem1P60897 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.28■□□□□ 0.04
Sem1P60897 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
Sem1P60897 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sem1P60897 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.28■□□□□ 0.04
Sem1P60897 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sem1P60897 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sem1P60897 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sem1P60897 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sem1P60897 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sem1P60897 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sem1P60897 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sem1P60897 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sem1P60897 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sem1P60897 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.27■□□□□ 0.04
Sem1P60897 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sem1P60897 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sem1P60897 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sem1P60897 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sem1P60897 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.27■□□□□ 0.04
Sem1P60897 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Sem1P60897 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.27■□□□□ 0.03
Sem1P60897 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sem1P60897 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Sem1P60897 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sem1P60897 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sem1P60897 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sem1P60897 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sem1P60897 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sem1P60897 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sem1P60897 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sem1P60897 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sem1P60897 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sem1P60897 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms