Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.33□□□□□ -0.12
Sf3b6P59708 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Gm12085-201ENSMUST00000119263 940 ntBASIC14.33□□□□□ -0.12
Sf3b6P59708 Gm38027-201ENSMUST00000192315 235 ntBASIC14.33□□□□□ -0.12
Sf3b6P59708 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sf3b6P59708 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sf3b6P59708 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 BC037039-201ENSMUST00000192003 2205 ntBASIC14.32□□□□□ -0.12
Sf3b6P59708 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Gm13186-201ENSMUST00000118031 316 ntBASIC14.32□□□□□ -0.12
Sf3b6P59708 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Gm10252-201ENSMUST00000209541 832 ntBASIC14.32□□□□□ -0.12
Sf3b6P59708 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sf3b6P59708 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3b6P59708 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.31□□□□□ -0.12
Sf3b6P59708 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Gm715-201ENSMUST00000117865 831 ntBASIC14.31□□□□□ -0.12
Sf3b6P59708 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Gm36967-201ENSMUST00000193814 266 ntBASIC14.31□□□□□ -0.12
Sf3b6P59708 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.31□□□□□ -0.12
Sf3b6P59708 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3b6P59708 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sf3b6P59708 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sf3b6P59708 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sf3b6P59708 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Sf3b6P59708 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Sf3b6P59708 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.3□□□□□ -0.12
Sf3b6P59708 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.3□□□□□ -0.12
Sf3b6P59708 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms