Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm10819-201ENSMUST00000099988 561 ntBASIC14.45□□□□□ -0.1
Cldn18P56857 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.45□□□□□ -0.1
Cldn18P56857 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn18P56857 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn18P56857 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn18P56857 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn18P56857 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Cldn18P56857 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn18P56857 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cldn18P56857 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cldn18P56857 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.44□□□□□ -0.1
Cldn18P56857 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.44□□□□□ -0.1
Cldn18P56857 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cldn18P56857 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn18P56857 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cldn18P56857 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn18P56857 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.43□□□□□ -0.1
Cldn18P56857 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Cldn18P56857 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Cldn18P56857 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Cldn18P56857 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.43□□□□□ -0.1
Cldn18P56857 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.43□□□□□ -0.1
Cldn18P56857 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Cldn18P56857 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.43□□□□□ -0.1
Cldn18P56857 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cldn18P56857 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn18P56857 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cldn18P56857 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.42□□□□□ -0.1
Cldn18P56857 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldn18P56857 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Gm9103-201ENSMUST00000119371 405 ntBASIC14.42□□□□□ -0.1
Cldn18P56857 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.42□□□□□ -0.1
Cldn18P56857 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cldn18P56857 Mir6404-201ENSMUST00000183699 94 ntBASIC14.42□□□□□ -0.1
Cldn18P56857 Gm44454-201ENSMUST00000198541 138 ntBASIC14.42□□□□□ -0.1
Cldn18P56857 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.42□□□□□ -0.1
Cldn18P56857 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cldn18P56857 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldn18P56857 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn18P56857 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn18P56857 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn18P56857 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldn18P56857 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms