Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Atxn1P54254 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.98■□□□□ 0.15
Atxn1P54254 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.98■□□□□ 0.15
Atxn1P54254 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Gm27628-201ENSMUST00000184911 107 ntBASIC15.98■□□□□ 0.15
Atxn1P54254 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Gm29707-201ENSMUST00000196325 491 ntBASIC15.98■□□□□ 0.15
Atxn1P54254 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Atxn1P54254 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Atxn1P54254 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Atxn1P54254 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.98■□□□□ 0.15
Atxn1P54254 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Atxn1P54254 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Atxn1P54254 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Atxn1P54254 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.97■□□□□ 0.15
Atxn1P54254 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.97■□□□□ 0.15
Atxn1P54254 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.97■□□□□ 0.15
Atxn1P54254 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.97■□□□□ 0.15
Atxn1P54254 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.97■□□□□ 0.15
Atxn1P54254 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.97■□□□□ 0.15
Atxn1P54254 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Atxn1P54254 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Atxn1P54254 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.97■□□□□ 0.15
Atxn1P54254 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.97■□□□□ 0.15
Atxn1P54254 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atxn1P54254 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Atxn1P54254 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atxn1P54254 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atxn1P54254 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Atxn1P54254 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.96■□□□□ 0.15
Atxn1P54254 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.96■□□□□ 0.15
Atxn1P54254 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atxn1P54254 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atxn1P54254 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atxn1P54254 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Atxn1P54254 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.96■□□□□ 0.15
Atxn1P54254 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atxn1P54254 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atxn1P54254 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atxn1P54254 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Atxn1P54254 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Atxn1P54254 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Atxn1P54254 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Atxn1P54254 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Atxn1P54254 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Atxn1P54254 Gm25745-201ENSMUST00000174945 133 ntBASIC15.95■□□□□ 0.14
Atxn1P54254 Gm6550-201ENSMUST00000187574 993 ntBASIC15.95■□□□□ 0.14
Atxn1P54254 Gm43438-201ENSMUST00000198133 379 ntBASIC15.95■□□□□ 0.14
Atxn1P54254 Gm18421-201ENSMUST00000204122 625 ntBASIC15.95■□□□□ 0.14
Atxn1P54254 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.95■□□□□ 0.14
Atxn1P54254 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Atxn1P54254 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Atxn1P54254 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Atxn1P54254 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms