Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox1P53783 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Sox1P53783 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.44■□□□□ 0.22
Sox1P53783 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox1P53783 Rprl2-201ENSMUST00000157150 290 ntBASIC16.44■□□□□ 0.22
Sox1P53783 Gm5177-201ENSMUST00000183092 997 ntBASIC16.44■□□□□ 0.22
Sox1P53783 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.44■□□□□ 0.22
Sox1P53783 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox1P53783 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Sox1P53783 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox1P53783 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox1P53783 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox1P53783 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox1P53783 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox1P53783 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Sox1P53783 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.43■□□□□ 0.22
Sox1P53783 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.43■□□□□ 0.22
Sox1P53783 Gm13223-201ENSMUST00000118609 747 ntBASIC16.43■□□□□ 0.22
Sox1P53783 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox1P53783 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sox1P53783 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.43■□□□□ 0.22
Sox1P53783 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox1P53783 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox1P53783 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sox1P53783 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 Mir6420-201ENSMUST00000185032 102 ntBASIC16.42■□□□□ 0.22
Sox1P53783 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox1P53783 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.42■□□□□ 0.22
Sox1P53783 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sox1P53783 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sox1P53783 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sox1P53783 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.41■□□□□ 0.22
Sox1P53783 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.41■□□□□ 0.22
Sox1P53783 Gm27301-201ENSMUST00000184012 127 ntBASIC16.41■□□□□ 0.22
Sox1P53783 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.41■□□□□ 0.22
Sox1P53783 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Sox1P53783 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sox1P53783 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.41■□□□□ 0.22
Sox1P53783 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox1P53783 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox1P53783 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sox1P53783 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Sox1P53783 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sox1P53783 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.4■□□□□ 0.22
Sox1P53783 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.4■□□□□ 0.22
Sox1P53783 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Gm9794-201ENSMUST00000202370 423 ntBASIC16.4■□□□□ 0.22
Sox1P53783 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.4■□□□□ 0.22
Sox1P53783 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox1P53783 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox1P53783 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sox1P53783 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms