Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.88■□□□□ 0.61
LtbrP50284 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.88■□□□□ 0.61
LtbrP50284 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LtbrP50284 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LtbrP50284 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.87■□□□□ 0.61
LtbrP50284 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.87■□□□□ 0.61
LtbrP50284 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.87■□□□□ 0.61
LtbrP50284 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.87■□□□□ 0.61
LtbrP50284 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.87■□□□□ 0.61
LtbrP50284 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LtbrP50284 Mir6956-201ENSMUST00000183598 62 ntBASIC18.87■□□□□ 0.61
LtbrP50284 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.87■□□□□ 0.61
LtbrP50284 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.87■□□□□ 0.61
LtbrP50284 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LtbrP50284 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LtbrP50284 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LtbrP50284 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LtbrP50284 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LtbrP50284 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LtbrP50284 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LtbrP50284 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.86■□□□□ 0.61
LtbrP50284 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LtbrP50284 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.86■□□□□ 0.61
LtbrP50284 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.86■□□□□ 0.61
LtbrP50284 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.86■□□□□ 0.61
LtbrP50284 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.86■□□□□ 0.61
LtbrP50284 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LtbrP50284 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LtbrP50284 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LtbrP50284 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.85■□□□□ 0.61
LtbrP50284 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.85■□□□□ 0.61
LtbrP50284 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LtbrP50284 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LtbrP50284 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LtbrP50284 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LtbrP50284 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LtbrP50284 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LtbrP50284 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.84■□□□□ 0.61
LtbrP50284 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LtbrP50284 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
LtbrP50284 Gm4459-201ENSMUST00000118750 468 ntBASIC18.84■□□□□ 0.61
LtbrP50284 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LtbrP50284 Gm12497-201ENSMUST00000138778 237 ntBASIC18.84■□□□□ 0.61
LtbrP50284 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LtbrP50284 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.84■□□□□ 0.61
LtbrP50284 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LtbrP50284 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.84■□□□□ 0.61
LtbrP50284 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms