Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.41□□□□□ -0.26
Nkx2-1P50220 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Gm20760-201ENSMUST00000179197 648 ntBASIC13.41□□□□□ -0.26
Nkx2-1P50220 Gm37292-201ENSMUST00000192062 758 ntBASIC13.41□□□□□ -0.26
Nkx2-1P50220 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.41□□□□□ -0.26
Nkx2-1P50220 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.41□□□□□ -0.26
Nkx2-1P50220 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-1P50220 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-1P50220 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.4□□□□□ -0.26
Nkx2-1P50220 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx2-1P50220 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.39□□□□□ -0.27
Nkx2-1P50220 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Gm5643-201ENSMUST00000117081 966 ntBASIC13.39□□□□□ -0.27
Nkx2-1P50220 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx2-1P50220 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms