Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx2P48379 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.89■□□□□ 0.29
Rfx2P48379 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.89■□□□□ 0.29
Rfx2P48379 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.89■□□□□ 0.29
Rfx2P48379 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx2P48379 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.89■□□□□ 0.29
Rfx2P48379 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx2P48379 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx2P48379 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.89■□□□□ 0.29
Rfx2P48379 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Rfx2P48379 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx2P48379 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx2P48379 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx2P48379 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.88■□□□□ 0.29
Rfx2P48379 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rfx2P48379 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.88■□□□□ 0.29
Rfx2P48379 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.88■□□□□ 0.29
Rfx2P48379 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rfx2P48379 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.88■□□□□ 0.29
Rfx2P48379 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx2P48379 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.87■□□□□ 0.29
Rfx2P48379 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx2P48379 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx2P48379 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.87■□□□□ 0.29
Rfx2P48379 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx2P48379 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.87■□□□□ 0.29
Rfx2P48379 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.87■□□□□ 0.29
Rfx2P48379 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx2P48379 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx2P48379 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx2P48379 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx2P48379 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Rfx2P48379 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.86■□□□□ 0.29
Rfx2P48379 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.86■□□□□ 0.29
Rfx2P48379 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rfx2P48379 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rfx2P48379 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx2P48379 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfx2P48379 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.85■□□□□ 0.29
Rfx2P48379 Gm5864-201ENSMUST00000202263 970 ntBASIC16.85■□□□□ 0.29
Rfx2P48379 Gm44771-201ENSMUST00000206975 626 ntBASIC16.85■□□□□ 0.29
Rfx2P48379 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rfx2P48379 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfx2P48379 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfx2P48379 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfx2P48379 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx2P48379 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfx2P48379 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rfx2P48379 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rfx2P48379 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms