Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.22■□□□□ 0.03
Nkx2-6P43688 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-6P43688 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-6P43688 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Gm12497-201ENSMUST00000138778 237 ntBASIC15.22■□□□□ 0.03
Nkx2-6P43688 Gm4535-201ENSMUST00000182274 558 ntBASIC15.22■□□□□ 0.03
Nkx2-6P43688 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.22■□□□□ 0.03
Nkx2-6P43688 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.22■□□□□ 0.03
Nkx2-6P43688 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.22■□□□□ 0.03
Nkx2-6P43688 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Gm10355-201ENSMUST00000097146 517 ntBASIC15.22■□□□□ 0.03
Nkx2-6P43688 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-6P43688 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.21■□□□□ 0.03
Nkx2-6P43688 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nkx2-6P43688 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nkx2-6P43688 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nkx2-6P43688 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Nkx2-6P43688 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nkx2-6P43688 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
Nkx2-6P43688 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nkx2-6P43688 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Gm25990-201ENSMUST00000102440 86 ntBASIC15.2■□□□□ 0.02
Nkx2-6P43688 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Gm7230-201ENSMUST00000173026 815 ntBASIC15.2■□□□□ 0.02
Nkx2-6P43688 Mir5131-201ENSMUST00000175426 93 ntBASIC15.2■□□□□ 0.02
Nkx2-6P43688 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.2■□□□□ 0.02
Nkx2-6P43688 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.2■□□□□ 0.02
Nkx2-6P43688 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-6P43688 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.19■□□□□ 0.02
Nkx2-6P43688 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Mir5126-201ENSMUST00000175513 77 ntBASIC15.19■□□□□ 0.02
Nkx2-6P43688 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.19■□□□□ 0.02
Nkx2-6P43688 Gm27525-201ENSMUST00000184465 107 ntBASIC15.19■□□□□ 0.02
Nkx2-6P43688 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.19■□□□□ 0.02
Nkx2-6P43688 Gm9172-201ENSMUST00000212092 954 ntBASIC15.19■□□□□ 0.02
Nkx2-6P43688 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-6P43688 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms