Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Msh2P43247 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Msh2P43247 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Msh2P43247 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Msh2P43247 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.65■□□□□ 0.26
Msh2P43247 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Msh2P43247 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Msh2P43247 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Msh2P43247 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Msh2P43247 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.64■□□□□ 0.25
Msh2P43247 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Msh2P43247 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Msh2P43247 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Msh2P43247 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Msh2P43247 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.63■□□□□ 0.25
Msh2P43247 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.63■□□□□ 0.25
Msh2P43247 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Msh2P43247 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Msh2P43247 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Msh2P43247 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Msh2P43247 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Msh2P43247 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Msh2P43247 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Msh2P43247 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.62■□□□□ 0.25
Msh2P43247 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Msh2P43247 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Msh2P43247 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Msh2P43247 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Msh2P43247 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Msh2P43247 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.61■□□□□ 0.25
Msh2P43247 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Msh2P43247 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.61■□□□□ 0.25
Msh2P43247 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.61■□□□□ 0.25
Msh2P43247 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Msh2P43247 Gm7213-201ENSMUST00000215977 950 ntBASIC16.61■□□□□ 0.25
Msh2P43247 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Msh2P43247 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Msh2P43247 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh2P43247 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msh2P43247 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms