Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Mir6404-201ENSMUST00000183699 94 ntBASIC14.8□□□□□ -0.04
Nkx2-2P42586 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-2P42586 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.8□□□□□ -0.04
Nkx2-2P42586 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.79□□□□□ -0.04
Nkx2-2P42586 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-2P42586 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx2-2P42586 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-2P42586 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-2P42586 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-2P42586 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-2P42586 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-2P42586 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-2P42586 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.77□□□□□ -0.05
Nkx2-2P42586 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.77□□□□□ -0.05
Nkx2-2P42586 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-2P42586 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.77□□□□□ -0.05
Nkx2-2P42586 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx2-2P42586 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms