Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cxcl12P40224 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.58■□□□□ 0.24
Cxcl12P40224 Gm27301-201ENSMUST00000184012 127 ntBASIC16.58■□□□□ 0.24
Cxcl12P40224 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Gm45612-201ENSMUST00000211320 160 ntBASIC16.58■□□□□ 0.24
Cxcl12P40224 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.58■□□□□ 0.24
Cxcl12P40224 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cxcl12P40224 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.58■□□□□ 0.24
Cxcl12P40224 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.58■□□□□ 0.24
Cxcl12P40224 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Cxcl12P40224 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cxcl12P40224 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.58■□□□□ 0.24
Cxcl12P40224 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl12P40224 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.57■□□□□ 0.24
Cxcl12P40224 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Gm15427-201ENSMUST00000117288 531 ntBASIC16.57■□□□□ 0.24
Cxcl12P40224 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.57■□□□□ 0.24
Cxcl12P40224 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.57■□□□□ 0.24
Cxcl12P40224 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Cxcl12P40224 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.57■□□□□ 0.24
Cxcl12P40224 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cxcl12P40224 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl12P40224 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.56■□□□□ 0.24
Cxcl12P40224 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl12P40224 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.56■□□□□ 0.24
Cxcl12P40224 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl12P40224 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl12P40224 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Cxcl12P40224 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.56■□□□□ 0.24
Cxcl12P40224 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl12P40224 Gm15358-201ENSMUST00000119249 520 ntBASIC16.56■□□□□ 0.24
Cxcl12P40224 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.56■□□□□ 0.24
Cxcl12P40224 Gm25948-201ENSMUST00000175334 112 ntBASIC16.56■□□□□ 0.24
Cxcl12P40224 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.56■□□□□ 0.24
Cxcl12P40224 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cxcl12P40224 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.56■□□□□ 0.24
Cxcl12P40224 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.56■□□□□ 0.24
Cxcl12P40224 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl12P40224 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl12P40224 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl12P40224 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl12P40224 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl12P40224 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.55■□□□□ 0.24
Cxcl12P40224 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.55■□□□□ 0.24
Cxcl12P40224 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.55■□□□□ 0.24
Cxcl12P40224 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.55■□□□□ 0.24
Cxcl12P40224 Gm9682-201ENSMUST00000197505 556 ntBASIC16.55■□□□□ 0.24
Cxcl12P40224 Gm8969-201ENSMUST00000199694 526 ntBASIC16.55■□□□□ 0.24
Cxcl12P40224 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.55■□□□□ 0.24
Cxcl12P40224 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.55■□□□□ 0.24
Cxcl12P40224 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.55■□□□□ 0.24
Cxcl12P40224 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.55■□□□□ 0.24
Cxcl12P40224 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Cxcl12P40224 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl12P40224 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cxcl12P40224 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.54■□□□□ 0.24
Cxcl12P40224 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Gm13597-201ENSMUST00000121239 375 ntBASIC16.54■□□□□ 0.24
Cxcl12P40224 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.54■□□□□ 0.24
Cxcl12P40224 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.54■□□□□ 0.24
Cxcl12P40224 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms