Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.28■□□□□ 0.2
Fen1P39749 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fen1P39749 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Fen1P39749 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.27■□□□□ 0.2
Fen1P39749 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Fen1P39749 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.27■□□□□ 0.2
Fen1P39749 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.27■□□□□ 0.2
Fen1P39749 Gm5643-201ENSMUST00000117081 966 ntBASIC16.27■□□□□ 0.2
Fen1P39749 Gm7638-201ENSMUST00000121348 967 ntBASIC16.27■□□□□ 0.2
Fen1P39749 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.27■□□□□ 0.2
Fen1P39749 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.27■□□□□ 0.2
Fen1P39749 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.27■□□□□ 0.2
Fen1P39749 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fen1P39749 Prob1-201ENSMUST00000097619 3021 ntBASIC16.27■□□□□ 0.2
Fen1P39749 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Fen1P39749 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Fen1P39749 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Fen1P39749 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Fen1P39749 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Fen1P39749 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Fen1P39749 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Fen1P39749 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Fen1P39749 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Fen1P39749 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Fen1P39749 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.26■□□□□ 0.19
Fen1P39749 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Fen1P39749 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Fen1P39749 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Fen1P39749 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.26■□□□□ 0.19
Fen1P39749 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.26■□□□□ 0.19
Fen1P39749 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.26■□□□□ 0.19
Fen1P39749 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fen1P39749 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.25■□□□□ 0.19
Fen1P39749 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.25■□□□□ 0.19
Fen1P39749 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Fen1P39749 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.25■□□□□ 0.19
Fen1P39749 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.25■□□□□ 0.19
Fen1P39749 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.25■□□□□ 0.19
Fen1P39749 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fen1P39749 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Fen1P39749 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Fen1P39749 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fen1P39749 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fen1P39749 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fen1P39749 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Fen1P39749 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fen1P39749 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fen1P39749 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms