Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cdh4P39038 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh4P39038 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.42■□□□□ 0.06
Cdh4P39038 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Cdh4P39038 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Cdh4P39038 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdh4P39038 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdh4P39038 Gm18669-201ENSMUST00000216049 778 ntBASIC15.42■□□□□ 0.06
Cdh4P39038 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdh4P39038 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdh4P39038 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.42■□□□□ 0.06
Cdh4P39038 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdh4P39038 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.42■□□□□ 0.06
Cdh4P39038 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cdh4P39038 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdh4P39038 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh4P39038 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.41■□□□□ 0.06
Cdh4P39038 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.41■□□□□ 0.06
Cdh4P39038 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.41■□□□□ 0.06
Cdh4P39038 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cdh4P39038 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdh4P39038 Gm9103-201ENSMUST00000119371 405 ntBASIC15.41■□□□□ 0.06
Cdh4P39038 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdh4P39038 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.41■□□□□ 0.06
Cdh4P39038 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.41■□□□□ 0.06
Cdh4P39038 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.41■□□□□ 0.06
Cdh4P39038 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdh4P39038 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh4P39038 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Gm13312-201ENSMUST00000119631 718 ntBASIC15.4■□□□□ 0.06
Cdh4P39038 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.4■□□□□ 0.06
Cdh4P39038 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Cdh4P39038 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdh4P39038 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.4■□□□□ 0.06
Cdh4P39038 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.4■□□□□ 0.06
Cdh4P39038 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh4P39038 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh4P39038 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh4P39038 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh4P39038 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh4P39038 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdh4P39038 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh4P39038 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh4P39038 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh4P39038 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh4P39038 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.39■□□□□ 0.05
Cdh4P39038 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh4P39038 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 789.8 ms