Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.17□□□□□ -0.14
Upk2P38575 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.17□□□□□ -0.14
Upk2P38575 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Upk2P38575 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.17□□□□□ -0.14
Upk2P38575 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.17□□□□□ -0.14
Upk2P38575 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Upk2P38575 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Upk2P38575 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.16□□□□□ -0.14
Upk2P38575 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Gm6659-201ENSMUST00000174752 547 ntBASIC14.16□□□□□ -0.14
Upk2P38575 Gm23634-201ENSMUST00000175071 91 ntBASIC14.16□□□□□ -0.14
Upk2P38575 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.16□□□□□ -0.14
Upk2P38575 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Upk2P38575 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Upk2P38575 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk2P38575 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.15□□□□□ -0.14
Upk2P38575 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Upk2P38575 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.15□□□□□ -0.14
Upk2P38575 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.15□□□□□ -0.14
Upk2P38575 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Upk2P38575 Gm13836-201ENSMUST00000121159 501 ntBASIC14.15□□□□□ -0.14
Upk2P38575 Gm11950-201ENSMUST00000121615 838 ntBASIC14.15□□□□□ -0.14
Upk2P38575 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Gm45328-201ENSMUST00000210942 917 ntBASIC14.15□□□□□ -0.14
Upk2P38575 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.15□□□□□ -0.14
Upk2P38575 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk2P38575 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Upk2P38575 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.14□□□□□ -0.15
Upk2P38575 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.14□□□□□ -0.15
Upk2P38575 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.14□□□□□ -0.15
Upk2P38575 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Upk2P38575 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk2P38575 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms