Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LdlrP35951 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LdlrP35951 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LdlrP35951 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LdlrP35951 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LdlrP35951 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LdlrP35951 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LdlrP35951 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LdlrP35951 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LdlrP35951 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LdlrP35951 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
LdlrP35951 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.07■□□□□ 0.16
LdlrP35951 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.07■□□□□ 0.16
LdlrP35951 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LdlrP35951 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
LdlrP35951 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
LdlrP35951 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LdlrP35951 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.06■□□□□ 0.16
LdlrP35951 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LdlrP35951 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LdlrP35951 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LdlrP35951 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.06■□□□□ 0.16
LdlrP35951 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.06■□□□□ 0.16
LdlrP35951 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LdlrP35951 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LdlrP35951 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.06■□□□□ 0.16
LdlrP35951 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LdlrP35951 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LdlrP35951 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LdlrP35951 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.05■□□□□ 0.16
LdlrP35951 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.05■□□□□ 0.16
LdlrP35951 Gm13186-201ENSMUST00000118031 316 ntBASIC16.05■□□□□ 0.16
LdlrP35951 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LdlrP35951 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LdlrP35951 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LdlrP35951 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.04■□□□□ 0.16
LdlrP35951 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LdlrP35951 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LdlrP35951 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.03■□□□□ 0.16
LdlrP35951 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LdlrP35951 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
LdlrP35951 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.03■□□□□ 0.16
LdlrP35951 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LdlrP35951 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms