Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Sox5P35710 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sox5P35710 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sox5P35710 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sox5P35710 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Gm10812-201ENSMUST00000099864 546 ntBASIC17.63■□□□□ 0.41
Sox5P35710 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sox5P35710 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox5P35710 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sox5P35710 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sox5P35710 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sox5P35710 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sox5P35710 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.62■□□□□ 0.41
Sox5P35710 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sox5P35710 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sox5P35710 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.62■□□□□ 0.41
Sox5P35710 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox5P35710 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Sox5P35710 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.61■□□□□ 0.41
Sox5P35710 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Sox5P35710 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.61■□□□□ 0.41
Sox5P35710 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.61■□□□□ 0.41
Sox5P35710 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sox5P35710 Gm22240-201ENSMUST00000175225 82 ntBASIC17.61■□□□□ 0.41
Sox5P35710 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sox5P35710 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox5P35710 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sox5P35710 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Sox5P35710 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.6■□□□□ 0.41
Sox5P35710 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.6■□□□□ 0.41
Sox5P35710 Gm30025-201ENSMUST00000218555 728 ntBASIC17.6■□□□□ 0.41
Sox5P35710 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox5P35710 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sox5P35710 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Sox5P35710 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Sox5P35710 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sox5P35710 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms