Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Foxa1P35582 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Gm21362-201ENSMUST00000194272 928 ntBASIC14.92□□□□□ -0.02
Foxa1P35582 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxa1P35582 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Foxa1P35582 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Foxa1P35582 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Foxa1P35582 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.91□□□□□ -0.02
Foxa1P35582 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.91□□□□□ -0.02
Foxa1P35582 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.91□□□□□ -0.02
Foxa1P35582 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.91□□□□□ -0.02
Foxa1P35582 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.91□□□□□ -0.02
Foxa1P35582 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Foxa1P35582 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.91□□□□□ -0.02
Foxa1P35582 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxa1P35582 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.9□□□□□ -0.02
Foxa1P35582 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Foxa1P35582 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.9□□□□□ -0.02
Foxa1P35582 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.9□□□□□ -0.02
Foxa1P35582 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Foxa1P35582 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Foxa1P35582 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa1P35582 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.89□□□□□ -0.03
Foxa1P35582 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Foxa1P35582 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.89□□□□□ -0.03
Foxa1P35582 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Foxa1P35582 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.89□□□□□ -0.03
Foxa1P35582 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.89□□□□□ -0.03
Foxa1P35582 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa1P35582 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Foxa1P35582 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms