Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Rom1P32958 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.8□□□□□ -0.36
Rom1P32958 Gm12896-201ENSMUST00000118430 226 ntBASIC12.8□□□□□ -0.36
Rom1P32958 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.8□□□□□ -0.36
Rom1P32958 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.8□□□□□ -0.36
Rom1P32958 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.79□□□□□ -0.36
Rom1P32958 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.79□□□□□ -0.36
Rom1P32958 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rom1P32958 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.79□□□□□ -0.36
Rom1P32958 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.79□□□□□ -0.36
Rom1P32958 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Rom1P32958 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rom1P32958 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.78□□□□□ -0.36
Rom1P32958 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Rom1P32958 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rom1P32958 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Rom1P32958 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.78□□□□□ -0.36
Rom1P32958 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.78□□□□□ -0.36
Rom1P32958 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.78□□□□□ -0.36
Rom1P32958 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Rom1P32958 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.78□□□□□ -0.36
Rom1P32958 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rom1P32958 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rom1P32958 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rom1P32958 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rom1P32958 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.78□□□□□ -0.36
Rom1P32958 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Rom1P32958 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rom1P32958 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.77□□□□□ -0.36
Rom1P32958 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rom1P32958 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rom1P32958 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rom1P32958 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rom1P32958 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rom1P32958 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rom1P32958 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rom1P32958 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rom1P32958 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.77□□□□□ -0.37
Rom1P32958 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms