Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PdgfbP31240 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PdgfbP31240 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PdgfbP31240 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.09■□□□□ 0.17
PdgfbP31240 Gm25948-201ENSMUST00000175334 112 ntBASIC16.09■□□□□ 0.17
PdgfbP31240 Mir7023-201ENSMUST00000185093 64 ntBASIC16.09■□□□□ 0.17
PdgfbP31240 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.09■□□□□ 0.17
PdgfbP31240 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.09■□□□□ 0.17
PdgfbP31240 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PdgfbP31240 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PdgfbP31240 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PdgfbP31240 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PdgfbP31240 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PdgfbP31240 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PdgfbP31240 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PdgfbP31240 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
PdgfbP31240 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PdgfbP31240 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PdgfbP31240 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
PdgfbP31240 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PdgfbP31240 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PdgfbP31240 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PdgfbP31240 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PdgfbP31240 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PdgfbP31240 Gm15427-201ENSMUST00000117288 531 ntBASIC16.08■□□□□ 0.16
PdgfbP31240 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.08■□□□□ 0.16
PdgfbP31240 Gm11745-201ENSMUST00000121669 448 ntBASIC16.08■□□□□ 0.16
PdgfbP31240 Gm5745-201ENSMUST00000183748 313 ntBASIC16.08■□□□□ 0.16
PdgfbP31240 Gm9682-201ENSMUST00000197505 556 ntBASIC16.08■□□□□ 0.16
PdgfbP31240 Gm45612-201ENSMUST00000211320 160 ntBASIC16.08■□□□□ 0.16
PdgfbP31240 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PdgfbP31240 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PdgfbP31240 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PdgfbP31240 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PdgfbP31240 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.08■□□□□ 0.16
PdgfbP31240 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PdgfbP31240 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PdgfbP31240 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.08■□□□□ 0.16
PdgfbP31240 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Gm15358-201ENSMUST00000119249 520 ntBASIC16.07■□□□□ 0.16
PdgfbP31240 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.07■□□□□ 0.16
PdgfbP31240 Gm8969-201ENSMUST00000199694 526 ntBASIC16.07■□□□□ 0.16
PdgfbP31240 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.07■□□□□ 0.16
PdgfbP31240 Gm7787-201ENSMUST00000216858 688 ntBASIC16.07■□□□□ 0.16
PdgfbP31240 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PdgfbP31240 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.07■□□□□ 0.16
PdgfbP31240 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
PdgfbP31240 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.07■□□□□ 0.16
PdgfbP31240 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
PdgfbP31240 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PdgfbP31240 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.07■□□□□ 0.16
PdgfbP31240 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PdgfbP31240 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PdgfbP31240 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.06■□□□□ 0.16
PdgfbP31240 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PdgfbP31240 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.06■□□□□ 0.16
PdgfbP31240 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Gm8344-201ENSMUST00000119813 856 ntBASIC16.06■□□□□ 0.16
PdgfbP31240 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.06■□□□□ 0.16
PdgfbP31240 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PdgfbP31240 Gm5177-201ENSMUST00000183092 997 ntBASIC16.06■□□□□ 0.16
PdgfbP31240 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.06■□□□□ 0.16
PdgfbP31240 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.06■□□□□ 0.16
PdgfbP31240 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PdgfbP31240 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PdgfbP31240 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PdgfbP31240 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PdgfbP31240 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PdgfbP31240 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PdgfbP31240 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PdgfbP31240 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PdgfbP31240 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.05■□□□□ 0.16
PdgfbP31240 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PdgfbP31240 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PdgfbP31240 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PdgfbP31240 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms