Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Mmp3P28862 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.23■□□□□ 0.35
Mmp3P28862 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Mmp3P28862 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mmp3P28862 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.22■□□□□ 0.35
Mmp3P28862 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.22■□□□□ 0.35
Mmp3P28862 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.22■□□□□ 0.35
Mmp3P28862 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Mmp3P28862 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.22■□□□□ 0.35
Mmp3P28862 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.22■□□□□ 0.35
Mmp3P28862 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Mmp3P28862 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Mmp3P28862 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp3P28862 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp3P28862 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp3P28862 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp3P28862 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp3P28862 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp3P28862 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp3P28862 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp3P28862 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp3P28862 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.21■□□□□ 0.35
Mmp3P28862 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Mmp3P28862 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp3P28862 Gm7222-201ENSMUST00000117512 906 ntBASIC17.21■□□□□ 0.35
Mmp3P28862 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp3P28862 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.21■□□□□ 0.35
Mmp3P28862 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.21■□□□□ 0.35
Mmp3P28862 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.21■□□□□ 0.35
Mmp3P28862 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp3P28862 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.21■□□□□ 0.35
Mmp3P28862 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.21■□□□□ 0.35
Mmp3P28862 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.21■□□□□ 0.35
Mmp3P28862 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.21■□□□□ 0.34
Mmp3P28862 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.21■□□□□ 0.34
Mmp3P28862 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
Mmp3P28862 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.2■□□□□ 0.34
Mmp3P28862 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Mmp3P28862 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Mmp3P28862 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.2■□□□□ 0.34
Mmp3P28862 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.2■□□□□ 0.34
Mmp3P28862 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp3P28862 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Mmp3P28862 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.19■□□□□ 0.34
Mmp3P28862 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.19■□□□□ 0.34
Mmp3P28862 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Gm13036-201ENSMUST00000117799 748 ntBASIC17.19■□□□□ 0.34
Mmp3P28862 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Mmp3P28862 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.19■□□□□ 0.34
Mmp3P28862 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.19■□□□□ 0.34
Mmp3P28862 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.19■□□□□ 0.34
Mmp3P28862 Psmb5-202ENSMUST00000227257 622 ntBASIC17.19■□□□□ 0.34
Mmp3P28862 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Mmp3P28862 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Mmp3P28862 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.19■□□□□ 0.34
Mmp3P28862 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp3P28862 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 280 ms