Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm12497-201ENSMUST00000138778 237 ntBASIC16.02■□□□□ 0.16
Nckap1P28660 Gm4535-201ENSMUST00000182274 558 ntBASIC16.02■□□□□ 0.16
Nckap1P28660 Gm9172-201ENSMUST00000212092 954 ntBASIC16.02■□□□□ 0.16
Nckap1P28660 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nckap1P28660 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nckap1P28660 Gm10355-201ENSMUST00000097146 517 ntBASIC16.02■□□□□ 0.16
Nckap1P28660 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nckap1P28660 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nckap1P28660 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Nckap1P28660 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nckap1P28660 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nckap1P28660 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nckap1P28660 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.01■□□□□ 0.15
Nckap1P28660 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nckap1P28660 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Nckap1P28660 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nckap1P28660 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nckap1P28660 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.01■□□□□ 0.15
Nckap1P28660 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nckap1P28660 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nckap1P28660 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nckap1P28660 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nckap1P28660 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16■□□□□ 0.15
Nckap1P28660 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16■□□□□ 0.15
Nckap1P28660 Gm8655-201ENSMUST00000221159 852 ntBASIC16■□□□□ 0.15
Nckap1P28660 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Gm32996-201ENSMUST00000199828 1447 ntBASIC16■□□□□ 0.15
Nckap1P28660 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nckap1P28660 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Nckap1P28660 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Nckap1P28660 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16■□□□□ 0.15
Nckap1P28660 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Nckap1P28660 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.99■□□□□ 0.15
Nckap1P28660 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.99■□□□□ 0.15
Nckap1P28660 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.99■□□□□ 0.15
Nckap1P28660 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.99■□□□□ 0.15
Nckap1P28660 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.99■□□□□ 0.15
Nckap1P28660 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Nckap1P28660 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.99■□□□□ 0.15
Nckap1P28660 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.99■□□□□ 0.15
Nckap1P28660 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Nckap1P28660 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.99■□□□□ 0.15
Nckap1P28660 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nckap1P28660 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nckap1P28660 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.98■□□□□ 0.15
Nckap1P28660 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nckap1P28660 Gm4459-201ENSMUST00000118750 468 ntBASIC15.98■□□□□ 0.15
Nckap1P28660 Gm13418-201ENSMUST00000119097 944 ntBASIC15.98■□□□□ 0.15
Nckap1P28660 Gm1401-201ENSMUST00000122048 772 ntBASIC15.98■□□□□ 0.15
Nckap1P28660 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.98■□□□□ 0.15
Nckap1P28660 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Nckap1P28660 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.98■□□□□ 0.15
Nckap1P28660 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nckap1P28660 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nckap1P28660 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nckap1P28660 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nckap1P28660 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nckap1P28660 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.97■□□□□ 0.15
Nckap1P28660 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nckap1P28660 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nckap1P28660 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nckap1P28660 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nckap1P28660 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nckap1P28660 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nckap1P28660 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms