Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Col8a2P25318 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Col8a2P25318 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Col8a2P25318 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.45□□□□□ -0.26
Col8a2P25318 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col8a2P25318 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.45□□□□□ -0.26
Col8a2P25318 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.45□□□□□ -0.26
Col8a2P25318 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col8a2P25318 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col8a2P25318 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col8a2P25318 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Gm15372-201ENSMUST00000120729 834 ntBASIC13.44□□□□□ -0.26
Col8a2P25318 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.44□□□□□ -0.26
Col8a2P25318 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Rprl3-201ENSMUST00000157400 290 ntBASIC13.44□□□□□ -0.26
Col8a2P25318 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.44□□□□□ -0.26
Col8a2P25318 Gm6296-201ENSMUST00000222599 943 ntBASIC13.44□□□□□ -0.26
Col8a2P25318 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.44□□□□□ -0.26
Col8a2P25318 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col8a2P25318 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col8a2P25318 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col8a2P25318 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.43□□□□□ -0.26
Col8a2P25318 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Col8a2P25318 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.43□□□□□ -0.26
Col8a2P25318 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col8a2P25318 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col8a2P25318 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a2P25318 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Col8a2P25318 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col8a2P25318 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a2P25318 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms