Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.56■□□□□ 0.4
Pde6bP23440 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pde6bP23440 Gm25745-201ENSMUST00000174945 133 ntBASIC17.56■□□□□ 0.4
Pde6bP23440 Gm10060-201ENSMUST00000212002 111 ntBASIC17.56■□□□□ 0.4
Pde6bP23440 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.56■□□□□ 0.4
Pde6bP23440 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.56■□□□□ 0.4
Pde6bP23440 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.56■□□□□ 0.4
Pde6bP23440 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pde6bP23440 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pde6bP23440 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.56■□□□□ 0.4
Pde6bP23440 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6bP23440 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pde6bP23440 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pde6bP23440 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.55■□□□□ 0.4
Pde6bP23440 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.55■□□□□ 0.4
Pde6bP23440 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pde6bP23440 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Pde6bP23440 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pde6bP23440 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.55■□□□□ 0.4
Pde6bP23440 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6bP23440 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.54■□□□□ 0.4
Pde6bP23440 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pde6bP23440 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Gm1401-201ENSMUST00000122048 772 ntBASIC17.54■□□□□ 0.4
Pde6bP23440 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Gm27525-201ENSMUST00000184465 107 ntBASIC17.54■□□□□ 0.4
Pde6bP23440 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.54■□□□□ 0.4
Pde6bP23440 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pde6bP23440 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6bP23440 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pde6bP23440 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.53■□□□□ 0.4
Pde6bP23440 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.53■□□□□ 0.4
Pde6bP23440 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Pde6bP23440 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pde6bP23440 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pde6bP23440 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6bP23440 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.52■□□□□ 0.4
Pde6bP23440 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pde6bP23440 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pde6bP23440 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Pde6bP23440 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms