Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RaraP11416 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.46■□□□□ 0.39
RaraP11416 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
RaraP11416 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RaraP11416 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RaraP11416 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RaraP11416 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RaraP11416 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RaraP11416 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RaraP11416 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.45■□□□□ 0.38
RaraP11416 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.45■□□□□ 0.38
RaraP11416 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RaraP11416 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RaraP11416 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RaraP11416 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.44■□□□□ 0.38
RaraP11416 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.44■□□□□ 0.38
RaraP11416 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Gm18959-201ENSMUST00000208954 655 ntBASIC17.44■□□□□ 0.38
RaraP11416 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RaraP11416 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RaraP11416 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RaraP11416 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RaraP11416 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RaraP11416 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.43■□□□□ 0.38
RaraP11416 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RaraP11416 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.43■□□□□ 0.38
RaraP11416 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.43■□□□□ 0.38
RaraP11416 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RaraP11416 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RaraP11416 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RaraP11416 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RaraP11416 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RaraP11416 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RaraP11416 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RaraP11416 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.42■□□□□ 0.38
RaraP11416 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.42■□□□□ 0.38
RaraP11416 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.42■□□□□ 0.38
RaraP11416 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RaraP11416 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RaraP11416 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RaraP11416 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RaraP11416 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RaraP11416 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.41■□□□□ 0.38
RaraP11416 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RaraP11416 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.41■□□□□ 0.38
RaraP11416 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms