Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.29■□□□□ 0.04
ApoeP08226 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ApoeP08226 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.29■□□□□ 0.04
ApoeP08226 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ApoeP08226 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.29■□□□□ 0.04
ApoeP08226 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.29■□□□□ 0.04
ApoeP08226 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ApoeP08226 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ApoeP08226 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ApoeP08226 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.28■□□□□ 0.04
ApoeP08226 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ApoeP08226 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.28■□□□□ 0.04
ApoeP08226 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Gm36967-201ENSMUST00000193814 266 ntBASIC15.28■□□□□ 0.04
ApoeP08226 Trmt13-210ENSMUST00000198454 880 ntBASIC15.28■□□□□ 0.04
ApoeP08226 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.28■□□□□ 0.04
ApoeP08226 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.28■□□□□ 0.04
ApoeP08226 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.28■□□□□ 0.04
ApoeP08226 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ApoeP08226 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ApoeP08226 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
ApoeP08226 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ApoeP08226 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ApoeP08226 Gm5643-201ENSMUST00000117081 966 ntBASIC15.27■□□□□ 0.04
ApoeP08226 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.27■□□□□ 0.04
ApoeP08226 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Gm37856-201ENSMUST00000191634 999 ntBASIC15.27■□□□□ 0.04
ApoeP08226 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.27■□□□□ 0.04
ApoeP08226 Gm18115-201ENSMUST00000221209 621 ntBASIC15.27■□□□□ 0.04
ApoeP08226 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ApoeP08226 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ApoeP08226 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
ApoeP08226 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
ApoeP08226 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ApoeP08226 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ApoeP08226 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
ApoeP08226 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Phf7-203ENSMUST00000226565 1971 ntBASIC15.26■□□□□ 0.03
ApoeP08226 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ApoeP08226 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
ApoeP08226 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.26■□□□□ 0.03
ApoeP08226 Gm10698-201ENSMUST00000182663 604 ntBASIC15.26■□□□□ 0.03
ApoeP08226 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.26■□□□□ 0.03
ApoeP08226 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ApoeP08226 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ApoeP08226 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.26■□□□□ 0.03
ApoeP08226 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ApoeP08226 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms