Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TnfP06804 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.08■□□□□ 0.32
TnfP06804 Gm6443-201ENSMUST00000203599 874 ntBASIC17.08■□□□□ 0.32
TnfP06804 Gm10060-201ENSMUST00000212002 111 ntBASIC17.08■□□□□ 0.32
TnfP06804 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TnfP06804 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.07■□□□□ 0.32
TnfP06804 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TnfP06804 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TnfP06804 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.07■□□□□ 0.32
TnfP06804 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.07■□□□□ 0.32
TnfP06804 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.07■□□□□ 0.32
TnfP06804 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TnfP06804 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TnfP06804 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TnfP06804 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TnfP06804 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.06■□□□□ 0.32
TnfP06804 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TnfP06804 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Gm25990-201ENSMUST00000102440 86 ntBASIC17.06■□□□□ 0.32
TnfP06804 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Mir5131-201ENSMUST00000175426 93 ntBASIC17.06■□□□□ 0.32
TnfP06804 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.06■□□□□ 0.32
TnfP06804 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TnfP06804 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TnfP06804 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.05■□□□□ 0.32
TnfP06804 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.05■□□□□ 0.32
TnfP06804 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TnfP06804 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.05■□□□□ 0.32
TnfP06804 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.05■□□□□ 0.32
TnfP06804 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TnfP06804 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TnfP06804 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
TnfP06804 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TnfP06804 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TnfP06804 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.05■□□□□ 0.32
TnfP06804 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.04■□□□□ 0.32
TnfP06804 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TnfP06804 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.04■□□□□ 0.32
TnfP06804 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms