Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
P06344 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
P06344 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
P06344 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
P06344 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.35□□□□□ -0.11
P06344 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
P06344 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
P06344 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06344 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
P06344 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P06344 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
P06344 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.34□□□□□ -0.11
P06344 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P06344 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.34□□□□□ -0.11
P06344 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
P06344 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.34□□□□□ -0.11
P06344 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.34□□□□□ -0.11
P06344 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
P06344 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.34□□□□□ -0.11
P06344 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P06344 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P06344 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P06344 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
P06344 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06344 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
P06344 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
P06344 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06344 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
P06344 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
P06344 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.33□□□□□ -0.12
P06344 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.33□□□□□ -0.12
P06344 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.33□□□□□ -0.12
P06344 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.33□□□□□ -0.12
P06344 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.33□□□□□ -0.12
P06344 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.33□□□□□ -0.12
P06344 Gm44454-201ENSMUST00000198541 138 ntBASIC14.33□□□□□ -0.12
P06344 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.33□□□□□ -0.12
P06344 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.33□□□□□ -0.12
P06344 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.33□□□□□ -0.12
P06344 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.33□□□□□ -0.12
P06344 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.33□□□□□ -0.12
P06344 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
P06344 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
P06344 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
P06344 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06344 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
P06344 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
P06344 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06344 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06344 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms