Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.83□□□□□ -0.52
P06328 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Gm11336-201ENSMUST00000118168 334 ntBASIC11.83□□□□□ -0.52
P06328 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.83□□□□□ -0.52
P06328 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Gm7213-201ENSMUST00000215977 950 ntBASIC11.83□□□□□ -0.52
P06328 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
P06328 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.83□□□□□ -0.52
P06328 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P06328 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P06328 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P06328 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P06328 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.83□□□□□ -0.52
P06328 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.83□□□□□ -0.52
P06328 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.82□□□□□ -0.52
P06328 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P06328 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P06328 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
P06328 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
P06328 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
P06328 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.82□□□□□ -0.52
P06328 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.82□□□□□ -0.52
P06328 Gm29707-201ENSMUST00000196325 491 ntBASIC11.82□□□□□ -0.52
P06328 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.82□□□□□ -0.52
P06328 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Gm10566-201ENSMUST00000086739 996 ntBASIC11.82□□□□□ -0.52
P06328 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.82□□□□□ -0.52
P06328 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P06328 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
P06328 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P06328 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
P06328 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06328 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.81□□□□□ -0.52
P06328 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P06328 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.81□□□□□ -0.52
P06328 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
P06328 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P06328 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06328 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms